Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC004408.2-201ENST00000623613 2777 ntBASIC20.82■□□□□ 0.92
CCDC17Q96LX7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 SIGLEC16-201ENST00000599858 1437 ntBASIC20.82■□□□□ 0.92
CCDC17Q96LX7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 PRYP5-201ENST00000451909 266 ntBASIC20.82■□□□□ 0.92
CCDC17Q96LX7 OR7E14P-202ENST00000530490 1290 ntBASIC20.82■□□□□ 0.92
CCDC17Q96LX7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 MTDHP4-201ENST00000600287 670 ntBASIC20.82■□□□□ 0.92
CCDC17Q96LX7 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 AL353593.2-201ENST00000602529 1483 ntBASIC20.81■□□□□ 0.92
CCDC17Q96LX7 REXO1L9P-201ENST00000604264 2108 ntBASIC20.81■□□□□ 0.92
CCDC17Q96LX7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 RPS2P1-201ENST00000434010 821 ntBASIC20.81■□□□□ 0.92
CCDC17Q96LX7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC17Q96LX7 AL049757.1-201ENST00000616842 1596 ntBASIC20.8■□□□□ 0.92
CCDC17Q96LX7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 AC087289.5-201ENST00000586076 3175 ntBASIC20.8■□□□□ 0.92
CCDC17Q96LX7 BX276092.7-203ENST00000637198 1536 ntBASIC20.8■□□□□ 0.92
CCDC17Q96LX7 AC100803.2-201ENST00000562459 1963 ntBASIC20.8■□□□□ 0.92
CCDC17Q96LX7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.8■□□□□ 0.92
CCDC17Q96LX7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 AC116407.3-201ENST00000623905 1129 ntBASIC20.8■□□□□ 0.92
CCDC17Q96LX7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 AL022326.1-202ENST00000641533 845 ntBASIC20.8■□□□□ 0.92
CCDC17Q96LX7 AF228730.7-201ENST00000641842 219 ntBASIC20.8■□□□□ 0.92
CCDC17Q96LX7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC17Q96LX7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 FLJ13224-201ENST00000313737 1514 ntBASIC20.79■□□□□ 0.92
CCDC17Q96LX7 HLA-J-201ENST00000462773 1622 ntBASIC20.79■□□□□ 0.92
CCDC17Q96LX7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 AC073592.5-201ENST00000624854 528 ntBASIC20.79■□□□□ 0.92
CCDC17Q96LX7 AC107918.4-202ENST00000641623 219 ntBASIC20.79■□□□□ 0.92
CCDC17Q96LX7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC17Q96LX7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms