Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ITCHQ96J02 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITCHQ96J02 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITCHQ96J02 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ITCHQ96J02 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
ITCHQ96J02 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITCHQ96J02 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITCHQ96J02 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ITCHQ96J02 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITCHQ96J02 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITCHQ96J02 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ITCHQ96J02 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
ITCHQ96J02 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.08■□□□□ 0.32
ITCHQ96J02 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.08■□□□□ 0.32
ITCHQ96J02 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.08■□□□□ 0.32
ITCHQ96J02 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 MIR718-201ENST00000390190 70 ntBASIC17.08■□□□□ 0.32
ITCHQ96J02 MIR1238-201ENST00000408483 83 ntBASIC17.08■□□□□ 0.32
ITCHQ96J02 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 AL390955.1-201ENST00000428694 934 ntBASIC17.08■□□□□ 0.32
ITCHQ96J02 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.08■□□□□ 0.32
ITCHQ96J02 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.08■□□□□ 0.32
ITCHQ96J02 AC084018.2-201ENST00000613093 2607 ntBASIC17.08■□□□□ 0.32
ITCHQ96J02 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ITCHQ96J02 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITCHQ96J02 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
ITCHQ96J02 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ITCHQ96J02 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.08■□□□□ 0.32
ITCHQ96J02 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.08■□□□□ 0.32
ITCHQ96J02 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ITCHQ96J02 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 AC133963.1-201ENST00000504166 1679 ntBASIC17.07■□□□□ 0.32
ITCHQ96J02 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.07■□□□□ 0.32
ITCHQ96J02 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
ITCHQ96J02 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ITCHQ96J02 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.07■□□□□ 0.32
ITCHQ96J02 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 SEC1P-202ENST00000473944 940 ntBASIC17.07■□□□□ 0.32
ITCHQ96J02 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.07■□□□□ 0.32
ITCHQ96J02 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.07■□□□□ 0.32
ITCHQ96J02 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.07■□□□□ 0.32
ITCHQ96J02 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.07■□□□□ 0.32
ITCHQ96J02 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.07■□□□□ 0.32
ITCHQ96J02 AC100803.2-201ENST00000562459 1963 ntBASIC17.07■□□□□ 0.32
ITCHQ96J02 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ITCHQ96J02 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ITCHQ96J02 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ITCHQ96J02 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.07■□□□□ 0.32
ITCHQ96J02 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITCHQ96J02 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ITCHQ96J02 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ITCHQ96J02 AL138688.1-201ENST00000624851 1594 ntBASIC17.06■□□□□ 0.32
ITCHQ96J02 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.06■□□□□ 0.32
ITCHQ96J02 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
ITCHQ96J02 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ITCHQ96J02 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ITCHQ96J02 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
ITCHQ96J02 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
ITCHQ96J02 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ITCHQ96J02 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ITCHQ96J02 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 TSPY14P-201ENST00000303979 915 ntBASIC17.06■□□□□ 0.32
ITCHQ96J02 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.06■□□□□ 0.32
ITCHQ96J02 TSPY7P-201ENST00000431358 1114 ntBASIC17.06■□□□□ 0.32
ITCHQ96J02 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
ITCHQ96J02 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ITCHQ96J02 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.06■□□□□ 0.32
ITCHQ96J02 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.06■□□□□ 0.32
ITCHQ96J02 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.06■□□□□ 0.32
ITCHQ96J02 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.06■□□□□ 0.32
ITCHQ96J02 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms