Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 AC005332.3-201ENST00000589904 676 ntBASIC17.24■□□□□ 0.35
UBE2E3Q969T4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.24■□□□□ 0.35
UBE2E3Q969T4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 AC006116.8-202ENST00000587620 1550 ntBASIC17.23■□□□□ 0.35
UBE2E3Q969T4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 VENTXP5-201ENST00000523979 775 ntBASIC17.23■□□□□ 0.35
UBE2E3Q969T4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2E3Q969T4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBE2E3Q969T4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms