Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 AC003669.1-201ENST00000334569 611 ntBASIC21.8■■□□□ 1.08
CNKSR1Q969H4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 KLF4P1-201ENST00000412782 1185 ntBASIC21.8■■□□□ 1.08
CNKSR1Q969H4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 KRT19P2-202ENST00000557173 1012 ntBASIC21.8■■□□□ 1.08
CNKSR1Q969H4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 AC010507.1-201ENST00000633895 436 ntBASIC21.8■■□□□ 1.08
CNKSR1Q969H4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR1Q969H4 BCAR1-209ENST00000546196 1340 ntBASIC21.8■■□□□ 1.08
CNKSR1Q969H4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 ESPNP-201ENST00000270691 2015 ntBASIC21.79■■□□□ 1.08
CNKSR1Q969H4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR1Q969H4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 FAM58CP-201ENST00000435741 640 ntBASIC21.78■■□□□ 1.08
CNKSR1Q969H4 RHOQP3-201ENST00000437982 621 ntBASIC21.78■■□□□ 1.08
CNKSR1Q969H4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CNKSR1Q969H4 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.77■■□□□ 1.08
CNKSR1Q969H4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 AL139400.1-201ENST00000366220 510 ntBASIC21.77■■□□□ 1.08
CNKSR1Q969H4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 AC074386.1-202ENST00000463561 864 ntBASIC21.77■■□□□ 1.08
CNKSR1Q969H4 DUTP2-201ENST00000519164 463 ntBASIC21.77■■□□□ 1.08
CNKSR1Q969H4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.77■■□□□ 1.08
CNKSR1Q969H4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms