Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 AP000347.1-202ENST00000435868 847 ntBASIC19.07■□□□□ 0.64
DDX1Q92499 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.07■□□□□ 0.64
DDX1Q92499 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.07■□□□□ 0.64
DDX1Q92499 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.07■□□□□ 0.64
DDX1Q92499 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.07■□□□□ 0.64
DDX1Q92499 AC005332.3-201ENST00000589904 676 ntBASIC19.07■□□□□ 0.64
DDX1Q92499 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX1Q92499 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
DDX1Q92499 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
DDX1Q92499 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
DDX1Q92499 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
DDX1Q92499 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX1Q92499 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
DDX1Q92499 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
DDX1Q92499 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
DDX1Q92499 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX1Q92499 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX1Q92499 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX1Q92499 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
DDX1Q92499 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX1Q92499 AL355312.1-201ENST00000407115 2176 ntBASIC19.06■□□□□ 0.64
DDX1Q92499 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX1Q92499 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
DDX1Q92499 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
DDX1Q92499 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.06■□□□□ 0.64
DDX1Q92499 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX1Q92499 TSPY12P-201ENST00000421279 868 ntBASIC19.06■□□□□ 0.64
DDX1Q92499 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX1Q92499 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DDX1Q92499 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.06■□□□□ 0.64
DDX1Q92499 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX1Q92499 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
DDX1Q92499 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX1Q92499 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX1Q92499 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX1Q92499 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX1Q92499 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX1Q92499 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DDX1Q92499 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX1Q92499 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DDX1Q92499 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX1Q92499 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 AC112698.1-201ENST00000510299 916 ntBASIC19.05■□□□□ 0.64
DDX1Q92499 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX1Q92499 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
DDX1Q92499 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX1Q92499 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX1Q92499 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 PP12613-201ENST00000424958 2230 ntBASIC19.05■□□□□ 0.64
DDX1Q92499 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX1Q92499 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX1Q92499 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX1Q92499 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX1Q92499 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
DDX1Q92499 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
DDX1Q92499 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX1Q92499 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.04■□□□□ 0.64
DDX1Q92499 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
DDX1Q92499 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX1Q92499 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms