Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC44A1Q8WWI5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC44A1Q8WWI5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 MIR3917-201ENST00000580971 93 ntBASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 AC116407.2-201ENST00000613639 860 ntBASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC44A1Q8WWI5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC44A1Q8WWI5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 INGX-201ENST00000359239 846 ntBASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 MIR1238-201ENST00000408483 83 ntBASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 AC009947.2-201ENST00000444014 672 ntBASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 MIR4785-201ENST00000585005 73 ntBASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms