Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 KRT126P-201ENST00000549467 1181 ntBASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AL031008.1-201ENST00000619963 541 ntBASIC18.04■□□□□ 0.48
CHD5Q8TDI0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AC134043.2-201ENST00000624206 2238 ntBASIC18.04■□□□□ 0.48
CHD5Q8TDI0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD5Q8TDI0 PMPCAP1-201ENST00000508114 1576 ntBASIC18.04■□□□□ 0.48
CHD5Q8TDI0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 SIRPAP1-201ENST00000448467 1770 ntBASIC18.03■□□□□ 0.48
CHD5Q8TDI0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 AC103564.2-201ENST00000432853 1299 ntBASIC18.03■□□□□ 0.48
CHD5Q8TDI0 AC109462.3-201ENST00000573934 613 ntBASIC18.03■□□□□ 0.48
CHD5Q8TDI0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 SLC25A6P4-201ENST00000586535 553 ntBASIC18.03■□□□□ 0.48
CHD5Q8TDI0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD5Q8TDI0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.02■□□□□ 0.48
CHD5Q8TDI0 RCN1P2-201ENST00000398357 915 ntBASIC18.02■□□□□ 0.47
CHD5Q8TDI0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHD5Q8TDI0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.02■□□□□ 0.47
CHD5Q8TDI0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHD5Q8TDI0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.02■□□□□ 0.47
CHD5Q8TDI0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHD5Q8TDI0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD5Q8TDI0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD5Q8TDI0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms