Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 PCED1CP-201ENST00000419887 785 ntBASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 FAM86EP-206ENST00000510506 987 ntBASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 AL355312.1-201ENST00000407115 2176 ntBASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 Z83836.1-201ENST00000624605 1642 ntBASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 AC112698.1-201ENST00000510299 916 ntBASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH19Q8TAB3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 AC068472.1-201ENST00000474589 881 ntBASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH19Q8TAB3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 IER3-202ENST00000376377 1350 ntBASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH19Q8TAB3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms