Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
SVIPQ8NHG7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SVIPQ8NHG7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 AL365181.2-201ENST00000606343 3222 ntBASIC11.15□□□□□ -0.62
SVIPQ8NHG7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 AC007292.2-201ENST00000593524 1812 ntBASIC11.15□□□□□ -0.62
SVIPQ8NHG7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SVIPQ8NHG7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
SVIPQ8NHG7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SVIPQ8NHG7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.15□□□□□ -0.63
SVIPQ8NHG7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.15□□□□□ -0.63
SVIPQ8NHG7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.15□□□□□ -0.63
SVIPQ8NHG7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.15□□□□□ -0.63
SVIPQ8NHG7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
SVIPQ8NHG7 GNAS-203ENST00000306120 1878 ntBASIC11.15□□□□□ -0.63
SVIPQ8NHG7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
SVIPQ8NHG7 LIMK1-201ENST00000336180 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 UBAP2-205ENST00000379239 2513 ntTSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SVIPQ8NHG7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms