Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 AC104794.3-201ENST00000566840 1248 ntBASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 TUBB1P2-201ENST00000422712 1306 ntBASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 TUBB1P1-201ENST00000503144 1300 ntBASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 AC004790.1-201ENST00000612686 536 ntBASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HMCN2Q8NDA2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 MIR1908-201ENST00000410394 80 ntBASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 MIR4722-201ENST00000578292 60 ntBASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 RN7SL589P-201ENST00000481268 310 ntBASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 MIR6080-201ENST00000617359 66 ntBASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 NFYC-AS1-201ENST00000606277 1687 ntBASIC9.88□□□□□ -0.83
HMCN2Q8NDA2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 AC234783.1-201ENST00000441761 496 ntBASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 AP006294.1-201ENST00000415407 339 ntBASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 AC244093.1-201ENST00000610837 814 ntBASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HMCN2Q8NDA2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms