Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 SEC1P-202ENST00000473944 940 ntBASIC18.6■□□□□ 0.57
CCDC89Q8N998 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 AL355312.1-201ENST00000407115 2176 ntBASIC18.59■□□□□ 0.57
CCDC89Q8N998 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 CYP2D8P-201ENST00000433633 1490 ntBASIC18.59■□□□□ 0.57
CCDC89Q8N998 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 MIR4497-201ENST00000583208 89 ntBASIC18.59■□□□□ 0.57
CCDC89Q8N998 AC008687.5-201ENST00000593746 558 ntBASIC18.59■□□□□ 0.57
CCDC89Q8N998 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC89Q8N998 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC89Q8N998 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC89Q8N998 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC89Q8N998 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC89Q8N998 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC89Q8N998 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
CCDC89Q8N998 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC89Q8N998 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC89Q8N998 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC89Q8N998 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC89Q8N998 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC89Q8N998 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC89Q8N998 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC89Q8N998 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC89Q8N998 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC89Q8N998 AC092865.7-201ENST00000641832 219 ntBASIC18.58■□□□□ 0.56
CCDC89Q8N998 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC89Q8N998 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CCDC89Q8N998 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC89Q8N998 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC89Q8N998 AC012313.1-201ENST00000593393 3059 ntBASIC18.58■□□□□ 0.56
CCDC89Q8N998 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC89Q8N998 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC89Q8N998 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms