Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 AL158047.1-201ENST00000445918 881 ntBASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 REXO1L12P-201ENST00000622156 912 ntBASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 AC113410.3-201ENST00000623366 203 ntBASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 AC011676.5-201ENST00000624864 2660 ntBASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 KRT8P7-201ENST00000533003 1432 ntBASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 FLJ13224-201ENST00000313737 1514 ntBASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIML2Q8N7C3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 GCSHP5-201ENST00000443090 522 ntBASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 AP005242.2-201ENST00000580065 1175 ntBASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIML2Q8N7C3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIML2Q8N7C3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRIML2Q8N7C3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIML2Q8N7C3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIML2Q8N7C3 AC009102.3-201ENST00000623118 1491 ntBASIC17.33■□□□□ 0.37
TRIML2Q8N7C3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 AC009065.1-201ENST00000564055 1225 ntBASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIML2Q8N7C3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 AL118508.1-201ENST00000613502 2345 ntBASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.32■□□□□ 0.36
TRIML2Q8N7C3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms