Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH20Q8N6Y1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 KRT17P6-201ENST00000453795 1220 ntBASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 AC074051.2-201ENST00000565115 352 ntBASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH20Q8N6Y1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 AC067852.2-201ENST00000590513 2313 ntBASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 MTCL1P1-201ENST00000446207 792 ntBASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 AC132938.6-201ENST00000623828 1655 ntBASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH20Q8N6Y1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 IGHV3-47-201ENST00000425060 335 ntBASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 KRT126P-201ENST00000549467 1181 ntBASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 AC012313.10-201ENST00000623509 926 ntBASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH20Q8N6Y1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH20Q8N6Y1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH20Q8N6Y1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH20Q8N6Y1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDH20Q8N6Y1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH20Q8N6Y1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH20Q8N6Y1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PCDH20Q8N6Y1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms