Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 AL022326.1-202ENST00000641533 845 ntBASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 AC018445.3-201ENST00000624177 1945 ntBASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 DNAJB3-202ENST00000449667 1266 ntBASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 MTDHP5-201ENST00000598980 586 ntBASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 AC005593.1-201ENST00000624894 515 ntBASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEFF1Q8IYR6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 AC064836.3-201ENST00000607928 673 ntBASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 AC097374.2-201ENST00000618617 1306 ntBASIC17.72■□□□□ 0.43
TMEFF1Q8IYR6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 PMPCAP1-201ENST00000508114 1576 ntBASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 LINC02084-201ENST00000606069 1096 ntBASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms