Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 AL050303.2-201ENST00000619798 666 ntBASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD2Q8IV50 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 MIPEPP3-201ENST00000412105 444 ntBASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 AC092068.3-201ENST00000587894 2016 ntBASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD2Q8IV50 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 AC092368.3-202ENST00000574180 1591 ntBASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 HLA-A-209ENST00000638375 975 ntBASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 KRT8P41-201ENST00000533985 1514 ntBASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LYSMD2Q8IV50 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD2Q8IV50 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms