Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CRLF3Q8IUI8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AP001094.4-201ENST00000579008 2176 ntBASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AC097488.1-201ENST00000507834 756 ntBASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AC130371.2-201ENST00000619443 611 ntBASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AC010947.1-201ENST00000623454 693 ntBASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 LINC01568-207ENST00000641790 1380 ntBASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AC022211.2-201ENST00000585075 2527 ntBASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AC099343.3-201ENST00000605834 2503 ntBASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.91■□□□□ 0.46
CRLF3Q8IUI8 AC093010.1-201ENST00000473625 1624 ntBASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 MCCD1P1-208ENST00000445732 328 ntBASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 AC008040.2-201ENST00000461049 708 ntBASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRLF3Q8IUI8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CRLF3Q8IUI8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.89■□□□□ 0.46
CRLF3Q8IUI8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CRLF3Q8IUI8 SDHAP2-201ENST00000455183 2001 ntBASIC17.89■□□□□ 0.46
CRLF3Q8IUI8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.89■□□□□ 0.46
CRLF3Q8IUI8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CRLF3Q8IUI8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.89■□□□□ 0.45
CRLF3Q8IUI8 AC009102.3-201ENST00000623118 1491 ntBASIC17.89■□□□□ 0.45
CRLF3Q8IUI8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.89■□□□□ 0.45
CRLF3Q8IUI8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CRLF3Q8IUI8 LINC00602-201ENST00000629776 2065 ntBASIC17.89■□□□□ 0.45
CRLF3Q8IUI8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.89■□□□□ 0.45
CRLF3Q8IUI8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CRLF3Q8IUI8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms