Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 KLF4P1-201ENST00000412782 1185 ntBASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 LAGE3P1-201ENST00000425356 484 ntBASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 AP002414.3-201ENST00000589352 1468 ntBASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AC073621.1-201ENST00000392730 636 ntBASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AC005104.2-201ENST00000427818 678 ntBASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 PMPCAP1-201ENST00000508114 1576 ntBASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RAI1Q7Z5J4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 AC093677.2-201ENST00000600169 1863 ntBASIC15.21■□□□□ 0.02
RAI1Q7Z5J4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 RPS2P28-201ENST00000314255 741 ntBASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 FAM220CP-201ENST00000395253 831 ntBASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 AC040169.1-201ENST00000565382 521 ntBASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 PHGDH-209ENST00000641074 1780 ntBASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 AL096828.2-201ENST00000567259 1965 ntBASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAI1Q7Z5J4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms