Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 AP002383.4-201ENST00000442518 975 ntBASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 AC068472.1-201ENST00000474589 881 ntBASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 NMU-205ENST00000511469 756 ntTSL 3 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 AC100803.2-201ENST00000562459 1963 ntBASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 MTCL1P1-201ENST00000446207 792 ntBASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 AP002414.4-201ENST00000589764 1148 ntBASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LYSMD3Q7Z3D4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 KRT18P1-202ENST00000452408 1331 ntBASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 AC022898.2-201ENST00000616822 1312 ntBASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 AC139713.2-201ENST00000641328 2723 ntBASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 AC112698.1-201ENST00000510299 916 ntBASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 NPAP1P7-201ENST00000613027 823 ntBASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.98■□□□□ 0.47
LYSMD3Q7Z3D4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms