Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 TNRC18P3-201ENST00000441896 2691 ntBASIC11.87□□□□□ -0.51
SCXQ7RTU7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SCXQ7RTU7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC11.87□□□□□ -0.51
SCXQ7RTU7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 AC067852.2-201ENST00000590513 2313 ntBASIC11.86□□□□□ -0.51
SCXQ7RTU7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 AC112497.1-201ENST00000624824 639 ntBASIC11.86□□□□□ -0.51
SCXQ7RTU7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 AC090164.3-201ENST00000610780 2143 ntBASIC11.86□□□□□ -0.51
SCXQ7RTU7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SCXQ7RTU7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SCXQ7RTU7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SCXQ7RTU7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SCXQ7RTU7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SCXQ7RTU7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SCXQ7RTU7 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.85□□□□□ -0.51
SCXQ7RTU7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SCXQ7RTU7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.85□□□□□ -0.51
SCXQ7RTU7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SCXQ7RTU7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms