Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTOP1Q7RTM1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
OTOP1Q7RTM1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.64■□□□□ 0.9
OTOP1Q7RTM1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
OTOP1Q7RTM1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
OTOP1Q7RTM1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
OTOP1Q7RTM1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.64■□□□□ 0.9
OTOP1Q7RTM1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
OTOP1Q7RTM1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 AC097374.2-201ENST00000618617 1306 ntBASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 AC108751.1-201ENST00000490852 363 ntBASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 AC008687.5-201ENST00000593746 558 ntBASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 MIR1199-201ENST00000621445 119 ntBASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 C20orf181-201ENST00000623918 480 ntBASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.64■□□□□ 0.89
OTOP1Q7RTM1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 KRT18P27-201ENST00000427733 1299 ntBASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 BCRP1-201ENST00000444246 691 ntBASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 AC005593.1-201ENST00000624894 515 ntBASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 AC092865.6-201ENST00000642101 219 ntBASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.63■□□□□ 0.89
OTOP1Q7RTM1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 HLA-J-202ENST00000469281 1241 ntBASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 AL096865.1-201ENST00000606796 927 ntBASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OTOP1Q7RTM1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms