Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 AC093010.1-201ENST00000473625 1624 ntBASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTCHD4Q6ZW05 LINC00602-201ENST00000629776 2065 ntBASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 NKILA-202ENST00000614771 2598 ntBASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 AC009102.3-201ENST00000623118 1491 ntBASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 MIR3180-5-201ENST00000583743 153 ntBASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 AL163051.1-201ENST00000569214 1512 ntBASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTCHD4Q6ZW05 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 TNRC18P3-201ENST00000441896 2691 ntBASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AC011676.5-201ENST00000624864 2660 ntBASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AL355312.1-201ENST00000407115 2176 ntBASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms