Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST2H2BCQ6DN03 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H2BCQ6DN03 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIST2H2BCQ6DN03 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST2H2BCQ6DN03 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 AL020989.1-201ENST00000422979 469 ntBASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 SPDYE22P-201ENST00000582158 798 ntBASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 AC116407.2-201ENST00000613639 860 ntBASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 SIRPAP1-201ENST00000448467 1770 ntBASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H2BCQ6DN03 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 KRT18P41-201ENST00000518924 1277 ntBASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST2H2BCQ6DN03 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 AC069335.1-201ENST00000489972 472 ntBASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 AL132655.2-201ENST00000596276 594 ntBASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 AC026120.1-201ENST00000611536 926 ntBASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST2H2BCQ6DN03 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
HIST2H2BCQ6DN03 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HIST2H2BCQ6DN03 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST2H2BCQ6DN03 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H2BCQ6DN03 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms