Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 DRAXINP1-201ENST00000437611 948 ntBASIC18.79■□□□□ 0.6
RNF43Q68DV7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 GNAS-203ENST00000306120 1878 ntBASIC18.79■□□□□ 0.6
RNF43Q68DV7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 AL024508.2-201ENST00000607749 1894 ntBASIC18.78■□□□□ 0.6
RNF43Q68DV7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 NUS1P1-201ENST00000446295 882 ntBASIC18.78■□□□□ 0.6
RNF43Q68DV7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 AC099398.1-201ENST00000567919 2776 ntBASIC18.78■□□□□ 0.6
RNF43Q68DV7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 AIRN-201ENST00000601203 4374 ntBASIC18.78■□□□□ 0.6
RNF43Q68DV7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF43Q68DV7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF43Q68DV7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF43Q68DV7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF43Q68DV7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF43Q68DV7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 EMBP1-201ENST00000458200 901 ntBASIC18.77■□□□□ 0.6
RNF43Q68DV7 RN7SL606P-201ENST00000472779 293 ntBASIC18.77■□□□□ 0.6
RNF43Q68DV7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF43Q68DV7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF43Q68DV7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF43Q68DV7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF43Q68DV7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
RNF43Q68DV7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF43Q68DV7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF43Q68DV7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RNF43Q68DV7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF43Q68DV7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF43Q68DV7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms