Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQA1Q5Y7H0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
HLA-DQA1Q5Y7H0 KRT18P1-202ENST00000452408 1331 ntBASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC016734.2-201ENST00000624325 1377 ntBASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 VENTXP7-201ENST00000475503 772 ntBASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQA1Q5Y7H0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC132938.6-201ENST00000623828 1655 ntBASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 DUTP2-201ENST00000519164 463 ntBASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC011840.4-201ENST00000578471 627 ntBASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 AL592071.1-201ENST00000611956 408 ntBASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 FLJ13224-201ENST00000313737 1514 ntBASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQA1Q5Y7H0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DQA1Q5Y7H0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms