Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 FAM197Y1-201ENST00000421178 764 ntBASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 AC097488.1-201ENST00000507834 756 ntBASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 MIR3180-4-201ENST00000582223 153 ntBASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00242Q5T6M2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 AC022898.2-201ENST00000616822 1312 ntBASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00242Q5T6M2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00242Q5T6M2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms