Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB6CQ53S08 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 REXO1L11P-201ENST00000620964 1927 ntBASIC18.61■□□□□ 0.57
RAB6CQ53S08 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 AC022898.2-201ENST00000616822 1312 ntBASIC18.61■□□□□ 0.57
RAB6CQ53S08 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 BX276092.5-203ENST00000456199 560 ntBASIC18.61■□□□□ 0.57
RAB6CQ53S08 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 MIR3180-1-201ENST00000580374 94 ntBASIC18.61■□□□□ 0.57
RAB6CQ53S08 MIR3180-3-201ENST00000584616 94 ntBASIC18.61■□□□□ 0.57
RAB6CQ53S08 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB6CQ53S08 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RAB6CQ53S08 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 TSSC2-201ENST00000450217 709 ntBASIC18.6■□□□□ 0.57
RAB6CQ53S08 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 AL121672.3-201ENST00000608644 468 ntBASIC18.6■□□□□ 0.57
RAB6CQ53S08 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB6CQ53S08 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB6CQ53S08 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 CHCHD2P8-201ENST00000429873 447 ntBASIC18.59■□□□□ 0.57
RAB6CQ53S08 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 GUSBP12-201ENST00000513727 720 ntBASIC18.59■□□□□ 0.57
RAB6CQ53S08 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 NPAP1P7-201ENST00000613027 823 ntBASIC18.59■□□□□ 0.57
RAB6CQ53S08 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB6CQ53S08 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB6CQ53S08 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.58■□□□□ 0.57
RAB6CQ53S08 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB6CQ53S08 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB6CQ53S08 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB6CQ53S08 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB6CQ53S08 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB6CQ53S08 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB6CQ53S08 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
RAB6CQ53S08 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB6CQ53S08 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB6CQ53S08 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB6CQ53S08 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB6CQ53S08 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB6CQ53S08 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms