Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 KRT18P41-201ENST00000518924 1277 ntBASIC15.23■□□□□ 0.03
C4orf46Q504U0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
C4orf46Q504U0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
C4orf46Q504U0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.23■□□□□ 0.03
C4orf46Q504U0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 AC106886.4-201ENST00000623557 2502 ntBASIC15.22■□□□□ 0.03
C4orf46Q504U0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.22■□□□□ 0.03
C4orf46Q504U0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 AC092437.1-201ENST00000624794 1048 ntBASIC15.22■□□□□ 0.03
C4orf46Q504U0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 AC105020.1-201ENST00000435356 2205 ntBASIC15.22■□□□□ 0.03
C4orf46Q504U0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 DOC2GP-204ENST00000639052 2548 ntBASIC15.22■□□□□ 0.03
C4orf46Q504U0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C4orf46Q504U0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.22■□□□□ 0.03
C4orf46Q504U0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 AP000593.1-201ENST00000393668 712 ntBASIC15.21■□□□□ 0.03
C4orf46Q504U0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 POU5F1P3-201ENST00000428824 1078 ntBASIC15.21■□□□□ 0.03
C4orf46Q504U0 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.21■□□□□ 0.03
C4orf46Q504U0 AC034268.1-201ENST00000441047 882 ntBASIC15.21■□□□□ 0.03
C4orf46Q504U0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 AC126755.1-201ENST00000525846 6405 ntBASIC15.21■□□□□ 0.03
C4orf46Q504U0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.21■□□□□ 0.03
C4orf46Q504U0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C4orf46Q504U0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
C4orf46Q504U0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.21■□□□□ 0.02
C4orf46Q504U0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
C4orf46Q504U0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
C4orf46Q504U0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
C4orf46Q504U0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C4orf46Q504U0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
C4orf46Q504U0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms