Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 ARMC10P1-201ENST00000313754 855 ntBASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 GUSBP12-201ENST00000513727 720 ntBASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 AC124864.1-201ENST00000623408 392 ntBASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN20Q4JDL3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 LINC00896-202ENST00000609602 2128 ntBASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PTPN20Q4JDL3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 BX276092.5-203ENST00000456199 560 ntBASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 AC090616.6-201ENST00000582640 721 ntBASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 AL121672.3-201ENST00000608644 468 ntBASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 AL353801.3-201ENST00000609898 542 ntBASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 AP000550.4-202ENST00000639755 178 ntBASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.83■□□□□ 0.6
PTPN20Q4JDL3 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 IGHV3-41-201ENST00000613121 348 ntBASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN20Q4JDL3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 AC026471.1-201ENST00000564629 3026 ntBASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN20Q4JDL3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms