Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NFX1Q12986 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.67■□□□□ 0.74
NFX1Q12986 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NFX1Q12986 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.67■□□□□ 0.74
NFX1Q12986 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.66■□□□□ 0.74
NFX1Q12986 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.66■□□□□ 0.74
NFX1Q12986 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.66■□□□□ 0.74
NFX1Q12986 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.66■□□□□ 0.74
NFX1Q12986 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NFX1Q12986 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.66■□□□□ 0.74
NFX1Q12986 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NFX1Q12986 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.66■□□□□ 0.74
NFX1Q12986 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.66■□□□□ 0.74
NFX1Q12986 AC023511.2-201ENST00000618803 211 ntBASIC19.66■□□□□ 0.74
NFX1Q12986 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
NFX1Q12986 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NFX1Q12986 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NFX1Q12986 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NFX1Q12986 BCL2-203ENST00000589955 5011 ntBASIC19.65■□□□□ 0.74
NFX1Q12986 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NFX1Q12986 ESPNP-201ENST00000270691 2015 ntBASIC19.65■□□□□ 0.74
NFX1Q12986 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NFX1Q12986 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
NFX1Q12986 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.65■□□□□ 0.74
NFX1Q12986 SCARNA2-201ENST00000458748 420 ntBASIC19.65■□□□□ 0.74
NFX1Q12986 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NFX1Q12986 SLC25A1P1-201ENST00000528351 927 ntBASIC19.65■□□□□ 0.74
NFX1Q12986 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NFX1Q12986 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
NFX1Q12986 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.65■□□□□ 0.74
NFX1Q12986 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.65■□□□□ 0.74
NFX1Q12986 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.65■□□□□ 0.74
NFX1Q12986 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NFX1Q12986 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NFX1Q12986 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NFX1Q12986 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
NFX1Q12986 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
NFX1Q12986 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.64■□□□□ 0.74
NFX1Q12986 AC135050.7-201ENST00000624508 2218 ntBASIC19.64■□□□□ 0.74
NFX1Q12986 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NFX1Q12986 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.64■□□□□ 0.74
NFX1Q12986 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.64■□□□□ 0.73
NFX1Q12986 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFX1Q12986 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFX1Q12986 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFX1Q12986 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NFX1Q12986 AC018712.1-201ENST00000455767 687 ntBASIC19.64■□□□□ 0.73
NFX1Q12986 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NFX1Q12986 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.64■□□□□ 0.73
NFX1Q12986 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.64■□□□□ 0.73
NFX1Q12986 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.64■□□□□ 0.73
NFX1Q12986 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NFX1Q12986 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.64■□□□□ 0.73
NFX1Q12986 AL049840.3-201ENST00000602669 611 ntBASIC19.64■□□□□ 0.73
NFX1Q12986 AL671883.3-201ENST00000603274 991 ntBASIC19.64■□□□□ 0.73
NFX1Q12986 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.64■□□□□ 0.73
NFX1Q12986 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.64■□□□□ 0.73
NFX1Q12986 AP005117.1-201ENST00000584346 1413 ntBASIC19.64■□□□□ 0.73
NFX1Q12986 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFX1Q12986 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFX1Q12986 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.64■□□□□ 0.73
NFX1Q12986 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.64■□□□□ 0.73
NFX1Q12986 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.64■□□□□ 0.73
NFX1Q12986 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFX1Q12986 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.64■□□□□ 0.73
NFX1Q12986 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.64■□□□□ 0.73
NFX1Q12986 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFX1Q12986 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NFX1Q12986 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFX1Q12986 AC007613.1-201ENST00000572811 2597 ntBASIC19.63■□□□□ 0.73
NFX1Q12986 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFX1Q12986 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NFX1Q12986 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms