Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CRYGFP-201ENST00000418459 633 ntBASIC16.67■□□□□ 0.26
CD47Q08722 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.67■□□□□ 0.26
CD47Q08722 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD47Q08722 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.67■□□□□ 0.26
CD47Q08722 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.67■□□□□ 0.26
CD47Q08722 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.67■□□□□ 0.26
CD47Q08722 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD47Q08722 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD47Q08722 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD47Q08722 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CD47Q08722 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD47Q08722 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
CD47Q08722 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 CROCCP2-202ENST00000412962 2773 ntBASIC16.66■□□□□ 0.26
CD47Q08722 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.66■□□□□ 0.26
CD47Q08722 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CD47Q08722 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CD47Q08722 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.66■□□□□ 0.26
CD47Q08722 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 AP003071.4-201ENST00000562276 1284 ntBASIC16.66■□□□□ 0.26
CD47Q08722 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.66■□□□□ 0.26
CD47Q08722 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.66■□□□□ 0.26
CD47Q08722 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD47Q08722 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.65■□□□□ 0.26
CD47Q08722 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.65■□□□□ 0.26
CD47Q08722 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CD47Q08722 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 AL138688.1-201ENST00000624851 1594 ntBASIC16.65■□□□□ 0.26
CD47Q08722 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.65■□□□□ 0.26
CD47Q08722 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
CD47Q08722 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.65■□□□□ 0.26
CD47Q08722 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.65■□□□□ 0.26
CD47Q08722 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD47Q08722 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.65■□□□□ 0.26
CD47Q08722 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.65■□□□□ 0.26
CD47Q08722 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.65■□□□□ 0.26
CD47Q08722 AP006294.2-201ENST00000641667 209 ntBASIC16.65■□□□□ 0.26
CD47Q08722 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.65■□□□□ 0.26
CD47Q08722 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CD47Q08722 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD47Q08722 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD47Q08722 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.65■□□□□ 0.26
CD47Q08722 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
CD47Q08722 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CD47Q08722 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.64■□□□□ 0.25
CD47Q08722 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.64■□□□□ 0.25
CD47Q08722 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.64■□□□□ 0.25
CD47Q08722 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CD47Q08722 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
CD47Q08722 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.64■□□□□ 0.25
CD47Q08722 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.64■□□□□ 0.25
CD47Q08722 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.64■□□□□ 0.25
CD47Q08722 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms