Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
AP1S1P61966 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
AP1S1P61966 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.02■□□□□ 0.48
AP1S1P61966 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
AP1S1P61966 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.02■□□□□ 0.48
AP1S1P61966 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.02■□□□□ 0.48
AP1S1P61966 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.02■□□□□ 0.48
AP1S1P61966 DDX43P3-201ENST00000441064 443 ntBASIC18.02■□□□□ 0.48
AP1S1P61966 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AP1S1P61966 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.02■□□□□ 0.48
AP1S1P61966 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.02■□□□□ 0.48
AP1S1P61966 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.02■□□□□ 0.48
AP1S1P61966 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.02■□□□□ 0.48
AP1S1P61966 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
AP1S1P61966 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
AP1S1P61966 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
AP1S1P61966 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP1S1P61966 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.02■□□□□ 0.47
AP1S1P61966 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.01■□□□□ 0.47
AP1S1P61966 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
AP1S1P61966 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S1P61966 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
AP1S1P61966 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S1P61966 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S1P61966 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.01■□□□□ 0.47
AP1S1P61966 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S1P61966 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.01■□□□□ 0.47
AP1S1P61966 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S1P61966 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S1P61966 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S1P61966 POM121L3P-201ENST00000419331 1163 ntBASIC18.01■□□□□ 0.47
AP1S1P61966 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.01■□□□□ 0.47
AP1S1P61966 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.01■□□□□ 0.47
AP1S1P61966 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S1P61966 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S1P61966 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.01■□□□□ 0.47
AP1S1P61966 PRELID1P1-202ENST00000567272 903 ntBASIC18.01■□□□□ 0.47
AP1S1P61966 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.01■□□□□ 0.47
AP1S1P61966 BNIP3P18-201ENST00000593976 575 ntBASIC18.01■□□□□ 0.47
AP1S1P61966 CLEC4GP1-201ENST00000596555 870 ntBASIC18.01■□□□□ 0.47
AP1S1P61966 AC099336.1-202ENST00000602961 463 ntBASIC18.01■□□□□ 0.47
AP1S1P61966 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.01■□□□□ 0.47
AP1S1P61966 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S1P61966 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S1P61966 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.01■□□□□ 0.47
AP1S1P61966 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S1P61966 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
AP1S1P61966 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S1P61966 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S1P61966 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S1P61966 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
AP1S1P61966 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 NOC2LP1-202ENST00000452600 2235 ntBASIC18■□□□□ 0.47
AP1S1P61966 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
AP1S1P61966 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18■□□□□ 0.47
AP1S1P61966 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
AP1S1P61966 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18■□□□□ 0.47
AP1S1P61966 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18■□□□□ 0.47
AP1S1P61966 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18■□□□□ 0.47
AP1S1P61966 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18■□□□□ 0.47
AP1S1P61966 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18■□□□□ 0.47
AP1S1P61966 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18■□□□□ 0.47
AP1S1P61966 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
AP1S1P61966 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18■□□□□ 0.47
AP1S1P61966 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S1P61966 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.99■□□□□ 0.47
AP1S1P61966 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
AP1S1P61966 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.99■□□□□ 0.47
AP1S1P61966 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.99■□□□□ 0.47
AP1S1P61966 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.99■□□□□ 0.47
AP1S1P61966 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms