Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
WNT3AP56704 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
WNT3AP56704 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
WNT3AP56704 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.11■□□□□ 0.49
WNT3AP56704 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
WNT3AP56704 AC005332.1-201ENST00000577698 1310 ntBASIC18.11■□□□□ 0.49
WNT3AP56704 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
WNT3AP56704 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
WNT3AP56704 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
WNT3AP56704 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
WNT3AP56704 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
WNT3AP56704 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.1■□□□□ 0.49
WNT3AP56704 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.1■□□□□ 0.49
WNT3AP56704 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.1■□□□□ 0.49
WNT3AP56704 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.1■□□□□ 0.49
WNT3AP56704 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.1■□□□□ 0.49
WNT3AP56704 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.1■□□□□ 0.49
WNT3AP56704 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.1■□□□□ 0.49
WNT3AP56704 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.1■□□□□ 0.49
WNT3AP56704 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.1■□□□□ 0.49
WNT3AP56704 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.1■□□□□ 0.49
WNT3AP56704 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
WNT3AP56704 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.1■□□□□ 0.49
WNT3AP56704 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.1■□□□□ 0.49
WNT3AP56704 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
WNT3AP56704 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.1■□□□□ 0.49
WNT3AP56704 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.1■□□□□ 0.49
WNT3AP56704 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.1■□□□□ 0.49
WNT3AP56704 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.09■□□□□ 0.49
WNT3AP56704 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.09■□□□□ 0.49
WNT3AP56704 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.09■□□□□ 0.49
WNT3AP56704 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
WNT3AP56704 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
WNT3AP56704 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.09■□□□□ 0.49
WNT3AP56704 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.09■□□□□ 0.49
WNT3AP56704 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.09■□□□□ 0.49
WNT3AP56704 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.09■□□□□ 0.49
WNT3AP56704 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.09■□□□□ 0.49
WNT3AP56704 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.09■□□□□ 0.49
WNT3AP56704 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.09■□□□□ 0.49
WNT3AP56704 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.09■□□□□ 0.49
WNT3AP56704 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
WNT3AP56704 AC009949.1-201ENST00000623048 1830 ntBASIC18.09■□□□□ 0.49
WNT3AP56704 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
WNT3AP56704 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.08■□□□□ 0.49
WNT3AP56704 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
WNT3AP56704 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
WNT3AP56704 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.08■□□□□ 0.49
WNT3AP56704 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
WNT3AP56704 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
WNT3AP56704 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.08■□□□□ 0.49
WNT3AP56704 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.08■□□□□ 0.49
WNT3AP56704 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
WNT3AP56704 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.08■□□□□ 0.48
WNT3AP56704 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
WNT3AP56704 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
WNT3AP56704 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.08■□□□□ 0.48
WNT3AP56704 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.08■□□□□ 0.48
WNT3AP56704 AC116407.2-201ENST00000613639 860 ntBASIC18.08■□□□□ 0.48
WNT3AP56704 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.08■□□□□ 0.48
WNT3AP56704 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.08■□□□□ 0.48
WNT3AP56704 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
WNT3AP56704 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
WNT3AP56704 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
WNT3AP56704 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.08■□□□□ 0.48
WNT3AP56704 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
WNT3AP56704 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
WNT3AP56704 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.08■□□□□ 0.48
WNT3AP56704 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms