Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC006116.8-202ENST00000587620 1550 ntBASIC17.02■□□□□ 0.31
NR1H2P55055 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NR1H2P55055 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H2P55055 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H2P55055 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.02■□□□□ 0.31
NR1H2P55055 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.01■□□□□ 0.31
NR1H2P55055 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NR1H2P55055 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.01■□□□□ 0.31
NR1H2P55055 CROCCP1-201ENST00000426910 5675 ntBASIC17.01■□□□□ 0.31
NR1H2P55055 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NR1H2P55055 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.01■□□□□ 0.31
NR1H2P55055 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.01■□□□□ 0.31
NR1H2P55055 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NR1H2P55055 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.01■□□□□ 0.31
NR1H2P55055 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.01■□□□□ 0.31
NR1H2P55055 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 RCN1P1-201ENST00000400413 996 ntBASIC17.01■□□□□ 0.31
NR1H2P55055 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.01■□□□□ 0.31
NR1H2P55055 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.01■□□□□ 0.31
NR1H2P55055 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 AC145285.6-201ENST00000604632 637 ntBASIC17.01■□□□□ 0.31
NR1H2P55055 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.01■□□□□ 0.31
NR1H2P55055 AP000525.1-201ENST00000608286 694 ntBASIC17.01■□□□□ 0.31
NR1H2P55055 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.01■□□□□ 0.31
NR1H2P55055 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NR1H2P55055 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
NR1H2P55055 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H2P55055 HEIH-201ENST00000623091 1652 ntBASIC17.01■□□□□ 0.31
NR1H2P55055 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NR1H2P55055 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17■□□□□ 0.31
NR1H2P55055 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NR1H2P55055 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17■□□□□ 0.31
NR1H2P55055 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NR1H2P55055 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17■□□□□ 0.31
NR1H2P55055 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NR1H2P55055 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 FSCN1P1-201ENST00000568912 1481 ntBASIC17■□□□□ 0.31
NR1H2P55055 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 LINC01126-201ENST00000623515 1646 ntBASIC17■□□□□ 0.31
NR1H2P55055 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NR1H2P55055 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17■□□□□ 0.31
NR1H2P55055 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17■□□□□ 0.31
NR1H2P55055 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 MIR1238-201ENST00000408483 83 ntBASIC17■□□□□ 0.31
NR1H2P55055 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17■□□□□ 0.31
NR1H2P55055 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17■□□□□ 0.31
NR1H2P55055 KRT18P16-201ENST00000510337 1294 ntBASIC17■□□□□ 0.31
NR1H2P55055 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17■□□□□ 0.31
NR1H2P55055 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17■□□□□ 0.31
NR1H2P55055 NAPSB-206ENST00000562112 1266 ntBASIC17■□□□□ 0.31
NR1H2P55055 TK2-213ENST00000563369 882 ntTSL 5 BASIC17■□□□□ 0.31
NR1H2P55055 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NR1H2P55055 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17■□□□□ 0.31
NR1H2P55055 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17■□□□□ 0.31
NR1H2P55055 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H2P55055 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
NR1H2P55055 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NR1H2P55055 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms