Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EMP3P54852 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EMP3P54852 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.42■□□□□ 0.38
EMP3P54852 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.42■□□□□ 0.38
EMP3P54852 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.42■□□□□ 0.38
EMP3P54852 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EMP3P54852 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.42■□□□□ 0.38
EMP3P54852 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.42■□□□□ 0.38
EMP3P54852 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EMP3P54852 AL136370.1-201ENST00000608166 691 ntBASIC17.42■□□□□ 0.38
EMP3P54852 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EMP3P54852 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.42■□□□□ 0.38
EMP3P54852 AC133485.6-201ENST00000624045 688 ntBASIC17.42■□□□□ 0.38
EMP3P54852 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.42■□□□□ 0.38
EMP3P54852 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EMP3P54852 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EMP3P54852 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EMP3P54852 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EMP3P54852 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EMP3P54852 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EMP3P54852 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.42■□□□□ 0.38
EMP3P54852 MST1L-201ENST00000442552 2185 ntBASIC17.42■□□□□ 0.38
EMP3P54852 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.42■□□□□ 0.38
EMP3P54852 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EMP3P54852 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 AL645608.8-201ENST00000606034 2086 ntBASIC17.41■□□□□ 0.38
EMP3P54852 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EMP3P54852 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
EMP3P54852 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.41■□□□□ 0.38
EMP3P54852 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EMP3P54852 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.41■□□□□ 0.38
EMP3P54852 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EMP3P54852 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.41■□□□□ 0.38
EMP3P54852 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 KRT18P48-201ENST00000434763 852 ntBASIC17.41■□□□□ 0.38
EMP3P54852 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.41■□□□□ 0.38
EMP3P54852 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.41■□□□□ 0.38
EMP3P54852 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.41■□□□□ 0.38
EMP3P54852 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC17.41■□□□□ 0.38
EMP3P54852 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.41■□□□□ 0.38
EMP3P54852 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.41■□□□□ 0.38
EMP3P54852 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.41■□□□□ 0.38
EMP3P54852 AC011498.5-201ENST00000592027 486 ntBASIC17.41■□□□□ 0.38
EMP3P54852 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
EMP3P54852 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.41■□□□□ 0.38
EMP3P54852 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EMP3P54852 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EMP3P54852 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EMP3P54852 SDHAP2-201ENST00000455183 2001 ntBASIC17.4■□□□□ 0.38
EMP3P54852 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.4■□□□□ 0.38
EMP3P54852 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EMP3P54852 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 AC012317.2-201ENST00000623305 2251 ntBASIC17.4■□□□□ 0.38
EMP3P54852 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.4■□□□□ 0.38
EMP3P54852 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.4■□□□□ 0.38
EMP3P54852 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.4■□□□□ 0.38
EMP3P54852 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.4■□□□□ 0.38
EMP3P54852 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
EMP3P54852 AC113404.2-201ENST00000507884 177 ntBASIC17.4■□□□□ 0.38
EMP3P54852 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
EMP3P54852 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.4■□□□□ 0.38
EMP3P54852 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.4■□□□□ 0.38
EMP3P54852 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EMP3P54852 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.4■□□□□ 0.38
EMP3P54852 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
EMP3P54852 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EMP3P54852 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms