Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2A1P52655 AC126177.1-201ENST00000547829 2218 ntBASIC17.6■□□□□ 0.41
GTF2A1P52655 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.6■□□□□ 0.41
GTF2A1P52655 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
GTF2A1P52655 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 FLJ16779-201ENST00000612722 7638 ntBASIC17.6■□□□□ 0.41
GTF2A1P52655 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
GTF2A1P52655 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GTF2A1P52655 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GTF2A1P52655 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2A1P52655 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
GTF2A1P52655 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2A1P52655 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2A1P52655 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.59■□□□□ 0.41
GTF2A1P52655 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.59■□□□□ 0.41
GTF2A1P52655 AC093010.1-201ENST00000473625 1624 ntBASIC17.59■□□□□ 0.41
GTF2A1P52655 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GTF2A1P52655 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GTF2A1P52655 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 AC027612.3-201ENST00000413684 1047 ntBASIC17.59■□□□□ 0.41
GTF2A1P52655 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
GTF2A1P52655 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2A1P52655 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2A1P52655 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2A1P52655 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2A1P52655 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2A1P52655 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2A1P52655 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.58■□□□□ 0.41
GTF2A1P52655 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2A1P52655 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
GTF2A1P52655 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2A1P52655 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
GTF2A1P52655 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2A1P52655 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.58■□□□□ 0.41
GTF2A1P52655 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
GTF2A1P52655 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GTF2A1P52655 LINC02228-203ENST00000641970 1355 ntBASIC17.58■□□□□ 0.4
GTF2A1P52655 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2A1P52655 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2A1P52655 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2A1P52655 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
GTF2A1P52655 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2A1P52655 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2A1P52655 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.58■□□□□ 0.4
GTF2A1P52655 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.58■□□□□ 0.4
GTF2A1P52655 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2A1P52655 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.58■□□□□ 0.4
GTF2A1P52655 AL356652.1-201ENST00000615962 565 ntBASIC17.58■□□□□ 0.4
GTF2A1P52655 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2A1P52655 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2A1P52655 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.58■□□□□ 0.4
GTF2A1P52655 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2A1P52655 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2A1P52655 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2A1P52655 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2A1P52655 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
GTF2A1P52655 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GTF2A1P52655 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GTF2A1P52655 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GTF2A1P52655 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2A1P52655 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
GTF2A1P52655 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 AC019069.1-201ENST00000610008 1333 ntBASIC17.57■□□□□ 0.4
GTF2A1P52655 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2A1P52655 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2A1P52655 CDV3P1-201ENST00000471403 739 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms