Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CLCN3P51790 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLCN3P51790 SCARNA2-201ENST00000458748 420 ntBASIC19.63■□□□□ 0.73
CLCN3P51790 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.63■□□□□ 0.73
CLCN3P51790 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.63■□□□□ 0.73
CLCN3P51790 AC021087.4-201ENST00000563761 564 ntBASIC19.63■□□□□ 0.73
CLCN3P51790 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.63■□□□□ 0.73
CLCN3P51790 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLCN3P51790 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.63■□□□□ 0.73
CLCN3P51790 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CLCN3P51790 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN3P51790 AL356309.3-201ENST00000624132 1934 ntBASIC19.63■□□□□ 0.73
CLCN3P51790 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN3P51790 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CLCN3P51790 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
CLCN3P51790 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 AC243591.1-201ENST00000452967 1364 ntBASIC19.62■□□□□ 0.73
CLCN3P51790 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CLCN3P51790 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN3P51790 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN3P51790 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN3P51790 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.62■□□□□ 0.73
CLCN3P51790 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN3P51790 BX640515.1-201ENST00000617215 977 ntBASIC19.62■□□□□ 0.73
CLCN3P51790 FAM215A-202ENST00000632077 792 ntBASIC19.62■□□□□ 0.73
CLCN3P51790 AP000867.4-201ENST00000641616 219 ntBASIC19.62■□□□□ 0.73
CLCN3P51790 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN3P51790 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CLCN3P51790 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CLCN3P51790 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLCN3P51790 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN3P51790 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN3P51790 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 IL9RP2-201ENST00000423948 1312 ntBASIC19.61■□□□□ 0.73
CLCN3P51790 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCN3P51790 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLCN3P51790 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCN3P51790 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCN3P51790 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCN3P51790 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN3P51790 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.61■□□□□ 0.73
CLCN3P51790 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCN3P51790 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 AP000997.3-201ENST00000623333 2250 ntBASIC19.61■□□□□ 0.73
CLCN3P51790 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN3P51790 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLCN3P51790 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN3P51790 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CLCN3P51790 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.6■□□□□ 0.73
CLCN3P51790 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCN3P51790 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCN3P51790 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.6■□□□□ 0.73
CLCN3P51790 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 AC122714.2-201ENST00000502787 707 ntBASIC19.6■□□□□ 0.73
CLCN3P51790 SLC25A1P1-201ENST00000528351 927 ntBASIC19.6■□□□□ 0.73
CLCN3P51790 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN3P51790 NKAPP1-205ENST00000585790 367 ntBASIC19.6■□□□□ 0.73
CLCN3P51790 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCN3P51790 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN3P51790 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.6■□□□□ 0.73
CLCN3P51790 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLCN3P51790 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms