Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB28P51157 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB28P51157 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
RAB28P51157 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RAB28P51157 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB28P51157 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB28P51157 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB28P51157 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB28P51157 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB28P51157 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB28P51157 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB28P51157 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB28P51157 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB28P51157 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 AC097374.2-201ENST00000618617 1306 ntBASIC17.28■□□□□ 0.36
RAB28P51157 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
RAB28P51157 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.28■□□□□ 0.36
RAB28P51157 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RAB28P51157 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RAB28P51157 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB28P51157 NUS1P1-201ENST00000446295 882 ntBASIC17.28■□□□□ 0.36
RAB28P51157 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB28P51157 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB28P51157 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.28■□□□□ 0.36
RAB28P51157 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB28P51157 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB28P51157 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAB28P51157 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB28P51157 HTR7P1-202ENST00000624664 4411 ntBASIC17.28■□□□□ 0.36
RAB28P51157 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RAB28P51157 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB28P51157 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB28P51157 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB28P51157 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB28P51157 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB28P51157 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB28P51157 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB28P51157 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB28P51157 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAB28P51157 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB28P51157 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB28P51157 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB28P51157 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB28P51157 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB28P51157 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RAB28P51157 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB28P51157 AC096633.1-201ENST00000422446 749 ntBASIC17.27■□□□□ 0.36
RAB28P51157 SLC25A6P5-201ENST00000435663 894 ntBASIC17.27■□□□□ 0.36
RAB28P51157 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB28P51157 AC009533.2-201ENST00000543664 586 ntBASIC17.27■□□□□ 0.36
RAB28P51157 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.27■□□□□ 0.36
RAB28P51157 PRELID1P1-202ENST00000567272 903 ntBASIC17.27■□□□□ 0.36
RAB28P51157 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB28P51157 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB28P51157 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB28P51157 CLEC4GP1-201ENST00000596555 870 ntBASIC17.27■□□□□ 0.36
RAB28P51157 AC099336.1-202ENST00000602961 463 ntBASIC17.27■□□□□ 0.36
RAB28P51157 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB28P51157 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB28P51157 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms