Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 SEC1P-202ENST00000473944 940 ntBASIC17.07■□□□□ 0.32
PRIM2P49643 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.07■□□□□ 0.32
PRIM2P49643 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.07■□□□□ 0.32
PRIM2P49643 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.07■□□□□ 0.32
PRIM2P49643 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PRIM2P49643 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.07■□□□□ 0.32
PRIM2P49643 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PRIM2P49643 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PRIM2P49643 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
PRIM2P49643 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.07■□□□□ 0.32
PRIM2P49643 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.07■□□□□ 0.32
PRIM2P49643 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.07■□□□□ 0.32
PRIM2P49643 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRIM2P49643 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.06■□□□□ 0.32
PRIM2P49643 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.06■□□□□ 0.32
PRIM2P49643 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.06■□□□□ 0.32
PRIM2P49643 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
PRIM2P49643 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.06■□□□□ 0.32
PRIM2P49643 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRIM2P49643 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.06■□□□□ 0.32
PRIM2P49643 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.06■□□□□ 0.32
PRIM2P49643 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 AC012317.2-201ENST00000623305 2251 ntBASIC17.06■□□□□ 0.32
PRIM2P49643 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
PRIM2P49643 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.06■□□□□ 0.32
PRIM2P49643 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
PRIM2P49643 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRIM2P49643 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRIM2P49643 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.06■□□□□ 0.32
PRIM2P49643 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.06■□□□□ 0.32
PRIM2P49643 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRIM2P49643 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PRIM2P49643 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRIM2P49643 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRIM2P49643 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.05■□□□□ 0.32
PRIM2P49643 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PRIM2P49643 LIN28AP1-201ENST00000429574 405 ntBASIC17.05■□□□□ 0.32
PRIM2P49643 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.05■□□□□ 0.32
PRIM2P49643 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 AC133561.5-201ENST00000635547 218 ntBASIC17.05■□□□□ 0.32
PRIM2P49643 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.05■□□□□ 0.32
PRIM2P49643 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRIM2P49643 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PRIM2P49643 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PRIM2P49643 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 AC093010.1-201ENST00000473625 1624 ntBASIC17.04■□□□□ 0.32
PRIM2P49643 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms