Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 KRT18P55-202ENST00000578578 1546 ntBASIC18.94■□□□□ 0.62
LHX1P48742 AL020996.1-203ENST00000536896 2307 ntBASIC18.94■□□□□ 0.62
LHX1P48742 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX1P48742 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.93■□□□□ 0.62
LHX1P48742 AC010460.3-201ENST00000511359 1579 ntBASIC18.93■□□□□ 0.62
LHX1P48742 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.93■□□□□ 0.62
LHX1P48742 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LHX1P48742 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.93■□□□□ 0.62
LHX1P48742 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 COX5BP2-201ENST00000392354 334 ntBASIC18.93■□□□□ 0.62
LHX1P48742 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.93■□□□□ 0.62
LHX1P48742 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.93■□□□□ 0.62
LHX1P48742 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 AC100803.2-201ENST00000562459 1963 ntBASIC18.93■□□□□ 0.62
LHX1P48742 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX1P48742 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX1P48742 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.92■□□□□ 0.62
LHX1P48742 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.92■□□□□ 0.62
LHX1P48742 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
LHX1P48742 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.92■□□□□ 0.62
LHX1P48742 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.92■□□□□ 0.62
LHX1P48742 AL121912.1-201ENST00000603683 238 ntBASIC18.92■□□□□ 0.62
LHX1P48742 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.92■□□□□ 0.62
LHX1P48742 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX1P48742 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
LHX1P48742 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LHX1P48742 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX1P48742 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LHX1P48742 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX1P48742 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX1P48742 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX1P48742 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
LHX1P48742 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.91■□□□□ 0.62
LHX1P48742 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX1P48742 AC135050.7-201ENST00000624508 2218 ntBASIC18.91■□□□□ 0.62
LHX1P48742 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX1P48742 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX1P48742 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX1P48742 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.91■□□□□ 0.62
LHX1P48742 RBM17P3-201ENST00000417687 1192 ntBASIC18.91■□□□□ 0.62
LHX1P48742 AC026396.1-201ENST00000419388 421 ntBASIC18.91■□□□□ 0.62
LHX1P48742 AC103564.2-201ENST00000432853 1299 ntBASIC18.91■□□□□ 0.62
LHX1P48742 DDX43P3-201ENST00000441064 443 ntBASIC18.91■□□□□ 0.62
LHX1P48742 ABCD1P5-201ENST00000445663 754 ntBASIC18.91■□□□□ 0.62
LHX1P48742 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.91■□□□□ 0.62
LHX1P48742 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.91■□□□□ 0.62
LHX1P48742 AC106795.1-205ENST00000512851 1056 ntBASIC18.91■□□□□ 0.62
LHX1P48742 AF238378.1-201ENST00000526806 358 ntBASIC18.91■□□□□ 0.62
LHX1P48742 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.91■□□□□ 0.62
LHX1P48742 AL031008.1-201ENST00000619963 541 ntBASIC18.91■□□□□ 0.62
LHX1P48742 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LHX1P48742 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms