Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MTHFRP42898 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTHFRP42898 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MTHFRP42898 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MTHFRP42898 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.7■□□□□ 0.58
MTHFRP42898 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.7■□□□□ 0.58
MTHFRP42898 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.7■□□□□ 0.58
MTHFRP42898 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
MTHFRP42898 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.7■□□□□ 0.58
MTHFRP42898 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.7■□□□□ 0.58
MTHFRP42898 AC064836.3-201ENST00000607928 673 ntBASIC18.7■□□□□ 0.58
MTHFRP42898 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.7■□□□□ 0.58
MTHFRP42898 AL032819.2-201ENST00000624543 2162 ntBASIC18.7■□□□□ 0.58
MTHFRP42898 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTHFRP42898 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MTHFRP42898 AC079776.2-201ENST00000641154 1609 ntBASIC18.7■□□□□ 0.58
MTHFRP42898 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
MTHFRP42898 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MTHFRP42898 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.7■□□□□ 0.58
MTHFRP42898 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
MTHFRP42898 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.69■□□□□ 0.58
MTHFRP42898 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MTHFRP42898 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.69■□□□□ 0.58
MTHFRP42898 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.69■□□□□ 0.58
MTHFRP42898 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.69■□□□□ 0.58
MTHFRP42898 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.69■□□□□ 0.58
MTHFRP42898 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.69■□□□□ 0.58
MTHFRP42898 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.69■□□□□ 0.58
MTHFRP42898 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 AC093503.3-201ENST00000624917 2352 ntBASIC18.69■□□□□ 0.58
MTHFRP42898 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MTHFRP42898 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
MTHFRP42898 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.68■□□□□ 0.58
MTHFRP42898 AC099343.3-201ENST00000605834 2503 ntBASIC18.68■□□□□ 0.58
MTHFRP42898 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.68■□□□□ 0.58
MTHFRP42898 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MTHFRP42898 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 BX005266.1-201ENST00000473402 457 ntBASIC18.68■□□□□ 0.58
MTHFRP42898 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.68■□□□□ 0.58
MTHFRP42898 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.68■□□□□ 0.58
MTHFRP42898 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
MTHFRP42898 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.68■□□□□ 0.58
MTHFRP42898 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
MTHFRP42898 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.68■□□□□ 0.58
MTHFRP42898 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 KRT18P28-201ENST00000453838 1332 ntBASIC18.68■□□□□ 0.58
MTHFRP42898 AC097374.2-201ENST00000618617 1306 ntBASIC18.68■□□□□ 0.58
MTHFRP42898 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
MTHFRP42898 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.68■□□□□ 0.58
MTHFRP42898 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.68■□□□□ 0.58
MTHFRP42898 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MTHFRP42898 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.67■□□□□ 0.58
MTHFRP42898 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
MTHFRP42898 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MTHFRP42898 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.67■□□□□ 0.58
MTHFRP42898 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.67■□□□□ 0.58
MTHFRP42898 KRT18P27-201ENST00000427733 1299 ntBASIC18.67■□□□□ 0.58
MTHFRP42898 AC108751.1-201ENST00000490852 363 ntBASIC18.67■□□□□ 0.58
MTHFRP42898 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms