Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.78□□□□□ -0.04
SNCAP37840 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.78□□□□□ -0.04
SNCAP37840 C1QBPP2-201ENST00000528754 825 ntBASIC14.78□□□□□ -0.04
SNCAP37840 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.78□□□□□ -0.04
SNCAP37840 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.78□□□□□ -0.04
SNCAP37840 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.78□□□□□ -0.04
SNCAP37840 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SNCAP37840 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
SNCAP37840 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNCAP37840 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SNCAP37840 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 MYLKP1-201ENST00000509077 1580 ntBASIC14.77□□□□□ -0.04
SNCAP37840 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SNCAP37840 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
SNCAP37840 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SNCAP37840 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SNCAP37840 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SNCAP37840 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SNCAP37840 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.77□□□□□ -0.05
SNCAP37840 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.77□□□□□ -0.05
SNCAP37840 AC073195.1-201ENST00000607241 877 ntBASIC14.77□□□□□ -0.05
SNCAP37840 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SNCAP37840 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.77□□□□□ -0.05
SNCAP37840 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.76□□□□□ -0.05
SNCAP37840 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SNCAP37840 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.76□□□□□ -0.05
SNCAP37840 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.76□□□□□ -0.05
SNCAP37840 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.76□□□□□ -0.05
SNCAP37840 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.76□□□□□ -0.05
SNCAP37840 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNCAP37840 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms