Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DDX43P3-201ENST00000441064 443 ntBASIC17.83■□□□□ 0.44
HMGCLP35914 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCLP35914 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCLP35914 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.83■□□□□ 0.44
HMGCLP35914 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.83■□□□□ 0.44
HMGCLP35914 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HMGCLP35914 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HMGCLP35914 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HMGCLP35914 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCLP35914 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLP35914 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 AC125634.1-201ENST00000438758 1403 ntBASIC17.82■□□□□ 0.44
HMGCLP35914 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCLP35914 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.82■□□□□ 0.44
HMGCLP35914 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HMGCLP35914 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 AC005336.2-201ENST00000593183 939 ntBASIC17.82■□□□□ 0.44
HMGCLP35914 Z69720.1-201ENST00000601483 472 ntBASIC17.82■□□□□ 0.44
HMGCLP35914 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 AL138831.2-201ENST00000606564 490 ntBASIC17.82■□□□□ 0.44
HMGCLP35914 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
HMGCLP35914 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 AC012317.2-201ENST00000623305 2251 ntBASIC17.82■□□□□ 0.44
HMGCLP35914 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HMGCLP35914 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCLP35914 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLP35914 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HMGCLP35914 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCLP35914 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.81■□□□□ 0.44
HMGCLP35914 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HMGCLP35914 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 TOB2P1-201ENST00000469761 992 ntBASIC17.81■□□□□ 0.44
HMGCLP35914 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.81■□□□□ 0.44
HMGCLP35914 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.81■□□□□ 0.44
HMGCLP35914 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.81■□□□□ 0.44
HMGCLP35914 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.81■□□□□ 0.44
HMGCLP35914 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGCLP35914 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.81■□□□□ 0.44
HMGCLP35914 AP005901.3-202ENST00000581653 237 ntBASIC17.81■□□□□ 0.44
HMGCLP35914 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGCLP35914 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.81■□□□□ 0.44
HMGCLP35914 AC092329.2-201ENST00000598402 547 ntBASIC17.81■□□□□ 0.44
HMGCLP35914 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 AC093458.2-201ENST00000623150 629 ntBASIC17.81■□□□□ 0.44
HMGCLP35914 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HMGCLP35914 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.81■□□□□ 0.44
HMGCLP35914 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCLP35914 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGCLP35914 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLP35914 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCLP35914 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCLP35914 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 AC134043.2-201ENST00000624206 2238 ntBASIC17.8■□□□□ 0.44
HMGCLP35914 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
HMGCLP35914 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HMGCLP35914 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMGCLP35914 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLP35914 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms