Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 IGHGP-201ENST00000390555 1178 ntBASIC18.9■□□□□ 0.62
RFC1P35251 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC1P35251 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 AP003733.1-201ENST00000491725 852 ntBASIC18.9■□□□□ 0.62
RFC1P35251 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.9■□□□□ 0.62
RFC1P35251 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC1P35251 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.9■□□□□ 0.62
RFC1P35251 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC1P35251 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RFC1P35251 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RFC1P35251 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.9■□□□□ 0.62
RFC1P35251 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RFC1P35251 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RFC1P35251 AC006116.8-202ENST00000587620 1550 ntBASIC18.89■□□□□ 0.62
RFC1P35251 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RFC1P35251 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RFC1P35251 HTR7P1-202ENST00000624664 4411 ntBASIC18.89■□□□□ 0.62
RFC1P35251 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RFC1P35251 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC1P35251 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.89■□□□□ 0.61
RFC1P35251 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC1P35251 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RFC1P35251 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RFC1P35251 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC1P35251 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC1P35251 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.89■□□□□ 0.61
RFC1P35251 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.89■□□□□ 0.61
RFC1P35251 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.89■□□□□ 0.61
RFC1P35251 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.89■□□□□ 0.61
RFC1P35251 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.89■□□□□ 0.61
RFC1P35251 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.89■□□□□ 0.61
RFC1P35251 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.89■□□□□ 0.61
RFC1P35251 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RFC1P35251 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RFC1P35251 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.89■□□□□ 0.61
RFC1P35251 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RFC1P35251 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.89■□□□□ 0.61
RFC1P35251 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC1P35251 LETM1P2-201ENST00000597330 2178 ntBASIC18.89■□□□□ 0.61
RFC1P35251 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.89■□□□□ 0.61
RFC1P35251 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.89■□□□□ 0.61
RFC1P35251 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFC1P35251 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
RFC1P35251 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RFC1P35251 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFC1P35251 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC1P35251 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 GNAS-203ENST00000306120 1878 ntBASIC18.88■□□□□ 0.61
RFC1P35251 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RFC1P35251 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC1P35251 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC1P35251 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFC1P35251 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC1P35251 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC1P35251 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.88■□□□□ 0.61
RFC1P35251 AL671277.2-201ENST00000458060 996 ntBASIC18.88■□□□□ 0.61
RFC1P35251 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.88■□□□□ 0.61
RFC1P35251 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.88■□□□□ 0.61
RFC1P35251 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.88■□□□□ 0.61
RFC1P35251 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.88■□□□□ 0.61
RFC1P35251 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RFC1P35251 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
RFC1P35251 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
RFC1P35251 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC1P35251 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.88■□□□□ 0.61
RFC1P35251 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFC1P35251 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFC1P35251 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFC1P35251 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms