Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDE4AP27815 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.54■■□□□ 1.2
PDE4AP27815 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC22.54■■□□□ 1.2
PDE4AP27815 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PDE4AP27815 CROCCP2-202ENST00000412962 2773 ntBASIC22.54■■□□□ 1.2
PDE4AP27815 KRT17P2-201ENST00000300992 1314 ntBASIC22.54■■□□□ 1.2
PDE4AP27815 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDE4AP27815 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC22.53■■□□□ 1.2
PDE4AP27815 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.53■■□□□ 1.2
PDE4AP27815 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC22.53■■□□□ 1.2
PDE4AP27815 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PDE4AP27815 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.53■■□□□ 1.2
PDE4AP27815 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE4AP27815 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE4AP27815 ECEL1P2-202ENST00000465689 757 ntBASIC22.53■■□□□ 1.2
PDE4AP27815 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.53■■□□□ 1.2
PDE4AP27815 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE4AP27815 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 AL139384.1-201ENST00000612143 3047 ntBASIC22.53■■□□□ 1.2
PDE4AP27815 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE4AP27815 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PDE4AP27815 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PDE4AP27815 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PDE4AP27815 AC132938.6-201ENST00000623828 1655 ntBASIC22.52■■□□□ 1.2
PDE4AP27815 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE4AP27815 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE4AP27815 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PDE4AP27815 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PDE4AP27815 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.52■■□□□ 1.2
PDE4AP27815 AC009947.2-201ENST00000444014 672 ntBASIC22.52■■□□□ 1.2
PDE4AP27815 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.52■■□□□ 1.2
PDE4AP27815 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE4AP27815 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PDE4AP27815 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE4AP27815 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE4AP27815 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE4AP27815 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.19
PDE4AP27815 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PDE4AP27815 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.51■■□□□ 1.19
PDE4AP27815 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE4AP27815 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC22.51■■□□□ 1.19
PDE4AP27815 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.51■■□□□ 1.19
PDE4AP27815 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE4AP27815 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PDE4AP27815 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PDE4AP27815 AL596275.1-201ENST00000423464 877 ntBASIC22.51■■□□□ 1.19
PDE4AP27815 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE4AP27815 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.51■■□□□ 1.19
PDE4AP27815 AC024243.1-201ENST00000609234 778 ntBASIC22.51■■□□□ 1.19
PDE4AP27815 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.51■■□□□ 1.19
PDE4AP27815 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 AP006294.2-201ENST00000641667 209 ntBASIC22.51■■□□□ 1.19
PDE4AP27815 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC22.51■■□□□ 1.19
PDE4AP27815 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE4AP27815 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE4AP27815 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.5■■□□□ 1.19
PDE4AP27815 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE4AP27815 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC22.5■■□□□ 1.19
PDE4AP27815 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE4AP27815 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PDE4AP27815 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE4AP27815 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
PDE4AP27815 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC22.5■■□□□ 1.19
PDE4AP27815 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms