Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.42■□□□□ 0.06
CD40P25942 FAM220CP-201ENST00000395253 831 ntBASIC15.42■□□□□ 0.06
CD40P25942 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.42■□□□□ 0.06
CD40P25942 AC096633.1-201ENST00000422446 749 ntBASIC15.42■□□□□ 0.06
CD40P25942 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.42■□□□□ 0.06
CD40P25942 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.42■□□□□ 0.06
CD40P25942 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CD40P25942 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.42■□□□□ 0.06
CD40P25942 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.42■□□□□ 0.06
CD40P25942 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.42■□□□□ 0.06
CD40P25942 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.42■□□□□ 0.06
CD40P25942 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD40P25942 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.42■□□□□ 0.06
CD40P25942 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CD40P25942 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
CD40P25942 KRT8P47-201ENST00000604727 1398 ntBASIC15.41■□□□□ 0.06
CD40P25942 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CD40P25942 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.41■□□□□ 0.06
CD40P25942 RBM17P3-201ENST00000417687 1192 ntBASIC15.41■□□□□ 0.06
CD40P25942 AC007967.3-201ENST00000434308 558 ntBASIC15.41■□□□□ 0.06
CD40P25942 AC106795.1-205ENST00000512851 1056 ntBASIC15.41■□□□□ 0.06
CD40P25942 AL662844.1-201ENST00000546340 181 ntBASIC15.41■□□□□ 0.06
CD40P25942 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 AC064862.7-201ENST00000604520 867 ntBASIC15.41■□□□□ 0.06
CD40P25942 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.41■□□□□ 0.06
CD40P25942 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.41■□□□□ 0.06
CD40P25942 AL355877.3-201ENST00000622820 899 ntBASIC15.41■□□□□ 0.06
CD40P25942 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CD40P25942 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.41■□□□□ 0.06
CD40P25942 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CD40P25942 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CD40P25942 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CD40P25942 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.41■□□□□ 0.06
CD40P25942 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CD40P25942 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.41■□□□□ 0.06
CD40P25942 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD40P25942 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.41■□□□□ 0.06
CD40P25942 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CD40P25942 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.4■□□□□ 0.06
CD40P25942 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CD40P25942 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CD40P25942 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CD40P25942 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.4■□□□□ 0.06
CD40P25942 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.4■□□□□ 0.06
CD40P25942 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.4■□□□□ 0.06
CD40P25942 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CD40P25942 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CD40P25942 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.4■□□□□ 0.06
CD40P25942 SLC25A6P4-201ENST00000586535 553 ntBASIC15.4■□□□□ 0.06
CD40P25942 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CD40P25942 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.4■□□□□ 0.06
CD40P25942 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CD40P25942 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.4■□□□□ 0.06
CD40P25942 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD40P25942 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.39■□□□□ 0.05
CD40P25942 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms