Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.338e-11■■■□□ 17.1
RPS3P23396 G6PD-208ENST00000489497 512 ntTSL 212.49□□□□□ -0.413e-10■■■□□ 17.1
RPS3P23396 TMEM256-202ENST00000575427 403 ntTSL 212.38□□□□□ -0.433e-10■■■□□ 17.1
RPS3P23396 FBXO7-209ENST00000492535 6884 ntTSL 57.7□□□□□ -1.188e-11■■■□□ 17.1
RPS3P23396 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.97□□□□□ -1.298e-11■■■□□ 17.1
RPS3P23396 ATP5C1-209ENST00000480528 460 ntTSL 22.33□□□□□ -2.043e-10■■■□□ 17.1
RPS3P23396 SSRP1-204ENST00000529002 648 ntTSL 517.75■□□□□ 0.431e-6■■■□□ 17.1
RPS3P23396 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.1■□□□□ 0.333e-6■■■□□ 17.1
RPS3P23396 SSRP1-202ENST00000293880 6296 ntTSL 215.75■□□□□ 0.111e-6■■■□□ 17.1
RPS3P23396 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.113e-6■■■□□ 17.1
RPS3P23396 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.14□□□□□ -0.153e-6■■■□□ 17.1
RPS3P23396 GNAI2-210ENST00000490122 2445 ntTSL 213.99□□□□□ -0.173e-6■■■□□ 17.1
RPS3P23396 CNDP2-202ENST00000324301 2349 ntTSL 1 (best) BASIC11.65□□□□□ -0.543e-6■■■□□ 17.1
RPS3P23396 SSRP1-201ENST00000278412 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.571e-6■■■□□ 17.1
RPS3P23396 CNDP2-209ENST00000579847 2653 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.623e-6■■■□□ 17.1
RPS3P23396 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC9.64□□□□□ -0.873e-6■■■□□ 17.1
RPS3P23396 GRB2-206ENST00000462266 601 ntTSL 37.45□□□□□ -1.223e-6■■■□□ 17.1
RPS3P23396 PSMA6-210ENST00000555050 309 ntTSL 25.52□□□□□ -1.536e-10■■■□□ 17.1
RPS3P23396 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.7□□□□□ -0.061e-6■■■□□ 17.1
RPS3P23396 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.7□□□□□ -0.061e-6■■■□□ 17.1
RPS3P23396 SLC38A5-209ENST00000497336 493 ntTSL 514.1□□□□□ -0.151e-6■■■□□ 17.1
RPS3P23396 PTTG1IP-205ENST00000474737 580 ntTSL 314.92□□□□□ -0.028e-7■■■□□ 17.1
RPS3P23396 PTTG1IP-207ENST00000494690 612 ntTSL 512.04□□□□□ -0.488e-7■■■□□ 17.1
RPS3P23396 GPT2-204ENST00000562801 2092 ntTSL 215.14■□□□□ 0.013e-8■■■□□ 17.1
RPS3P23396 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.253e-8■■■□□ 17.1
RPS3P23396 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC11.95□□□□□ -0.53e-8■■■□□ 17.1
RPS3P23396 GTF3C1-204ENST00000564664 933 ntTSL 511.74□□□□□ -0.533e-6■■■□□ 17.1
RPS3P23396 FGB-206ENST00000502545 1320 ntTSL 59.3□□□□□ -0.921e-12■■■□□ 17.1
RPS3P23396 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.931e-12■■■□□ 17.1
RPS3P23396 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.11□□□□□ -1.591e-12■■■□□ 17.1
RPS3P23396 RPS15-204ENST00000586656 436 ntTSL 314.6□□□□□ -0.071e-18■■■□□ 17.1
RPS3P23396 RPS15-213ENST00000617694 338 ntTSL 311.17□□□□□ -0.623e-18■■■□□ 17.1
RPS3P23396 CTNNB1-211ENST00000465552 878 ntTSL 29.65□□□□□ -0.861e-11■■■□□ 17.1
RPS3P23396 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.17■□□□□ 0.022e-7■■■□□ 17.1
RPS3P23396 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.34□□□□□ -0.432e-7■■■□□ 17.1
RPS3P23396 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.532e-7■■■□□ 17.1
RPS3P23396 MCM7-210ENST00000489841 2515 ntTSL 1 (best)9.7□□□□□ -0.862e-7■■■□□ 17.1
RPS3P23396 CFB-273ENST00000460718 768 ntTSL 511.06□□□□□ -0.645e-10■■■□□ 17.1
RPS3P23396 CD320-205ENST00000598299 577 ntTSL 220.11■□□□□ 0.812e-8■■■□□ 17.1
RPS3P23396 SLC38A3-204ENST00000445096 880 ntTSL 59.56□□□□□ -0.881e-6■■■□□ 17.1
RPS3P23396 DDB1-215ENST00000539712 1020 ntTSL 216.19■□□□□ 0.183e-7■■■□□ 17.1
RPS3P23396 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.096e-7■■■□□ 17.1
RPS3P23396 GAPDH-209ENST00000492719 930 ntTSL 312.86□□□□□ -0.358e-17■■■□□ 17.1
RPS3P23396 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.182e-7■■■□□ 17.1
RPS3P23396 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.95■□□□□ 0.142e-7■■■□□ 17.1
RPS3P23396 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.277e-17■■■□□ 17.1
RPS3P23396 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.397e-17■■■□□ 17.1
RPS3P23396 GAPDH-208ENST00000474249 1333 ntTSL 512.55□□□□□ -0.47e-17■■■□□ 17.1
RPS3P23396 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC11.64□□□□□ -0.557e-17■■■□□ 17.1
RPS3P23396 PGK1-202ENST00000474281 307 ntTSL 1 (best)2.03□□□□□ -2.081e-19■■■□□ 17.1
RPS3P23396 CCT5-212ENST00000514674 568 ntTSL 24.26□□□□□ -1.735e-23■■■□□ 17.1
RPS3P23396 RAN-208ENST00000537745 1065 ntTSL 1 (best)9.78□□□□□ -0.841e-8■■■□□ 17.1
RPS3P23396 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.353e-8■■■□□ 17.1
RPS3P23396 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.713e-8■■■□□ 17.1
RPS3P23396 TTC3-223ENST00000492275 769 ntTSL 325.22■■□□□ 1.633e-8■■■□□ 17.1
RPS3P23396 ARPC2-204ENST00000420104 482 ntTSL 324.68■■□□□ 1.543e-8■■■□□ 17.1
RPS3P23396 ARPC2-217ENST00000489598 1039 ntTSL 224.68■■□□□ 1.543e-8■■■□□ 17.1
RPS3P23396 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.533e-8■■■□□ 17.1
RPS3P23396 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.533e-8■■■□□ 17.1
RPS3P23396 ARPC2-214ENST00000480062 508 ntTSL 224.44■■□□□ 1.53e-8■■■□□ 17.1
RPS3P23396 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.29■■□□□ 1.483e-8■■■□□ 17.1
RPS3P23396 ARPC2-203ENST00000414983 713 ntTSL 323.65■■□□□ 1.383e-8■■■□□ 17.1
RPS3P23396 ARPC2-218ENST00000491780 577 ntTSL 423.45■■□□□ 1.343e-8■■■□□ 17.1
RPS3P23396 TTC3-212ENST00000463216 842 ntTSL 523.03■■□□□ 1.283e-8■■■□□ 17.1
RPS3P23396 ARPC2-205ENST00000420201 732 ntTSL 322.94■■□□□ 1.263e-8■■■□□ 17.1
RPS3P23396 TTC3-224ENST00000494243 861 ntTSL 522.88■■□□□ 1.253e-8■■■□□ 17.1
RPS3P23396 TTC3-217ENST00000481605 1540 ntTSL 522.59■■□□□ 1.213e-8■■■□□ 17.1
RPS3P23396 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.98■■□□□ 1.113e-8■■■□□ 17.1
RPS3P23396 RCE1-203ENST00000524849 1428 ntTSL 1 (best)21.93■■□□□ 1.13e-8■■■□□ 17.1
RPS3P23396 TTC3-210ENST00000450533 2451 ntTSL 1 (best)21.73■■□□□ 1.073e-8■■■□□ 17.1
RPS3P23396 RCE1-205ENST00000530610 413 ntTSL 320.59■□□□□ 0.893e-8■■■□□ 17.1
RPS3P23396 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.853e-8■■■□□ 17.1
RPS3P23396 BNIP3-204ENST00000633835 1062 ntTSL 320.3■□□□□ 0.843e-8■■■□□ 17.1
RPS3P23396 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.83e-8■■■□□ 17.1
RPS3P23396 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.86■□□□□ 0.773e-8■■■□□ 17.1
RPS3P23396 RCE1-207ENST00000533277 2719 ntTSL 219.69■□□□□ 0.743e-8■■■□□ 17.1
RPS3P23396 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.81■□□□□ 0.63e-8■■■□□ 17.1
RPS3P23396 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.43■□□□□ 0.541e-7■■■□□ 17.1
RPS3P23396 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.19■□□□□ 0.53e-8■■■□□ 17.1
RPS3P23396 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.433e-8■■■□□ 17.1
RPS3P23396 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.43e-8■■■□□ 17.1
RPS3P23396 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.383e-8■■■□□ 17.1
RPS3P23396 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.94■□□□□ 0.34e-6■■■□□ 17.1
RPS3P23396 ITGB2-215ENST00000518033 572 ntTSL 416.88■□□□□ 0.292e-6■■■□□ 17.1
RPS3P23396 P3H3-211ENST00000612048 2129 ntTSL 1 (best)16.82■□□□□ 0.283e-8■■■□□ 17.1
RPS3P23396 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.74■□□□□ 0.273e-8■■■□□ 17.1
RPS3P23396 SUMF2-214ENST00000452216 913 ntTSL 1 (best)16.74■□□□□ 0.273e-8■■■□□ 17.1
RPS3P23396 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.274e-6■■■□□ 17.1
RPS3P23396 TTC3-209ENST00000438055 3606 ntTSL 516.31■□□□□ 0.23e-8■■■□□ 17.1
RPS3P23396 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.16■□□□□ 0.182e-6■■■□□ 17.1
RPS3P23396 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.94■□□□□ 0.143e-8■■■□□ 17.1
RPS3P23396 SUMF2-209ENST00000436782 1683 ntTSL 1 (best)15.67■□□□□ 0.13e-8■■■□□ 17.1
RPS3P23396 TTC3-207ENST00000418766 3771 ntTSL 515.57■□□□□ 0.083e-8■■■□□ 17.1
RPS3P23396 ITGB2-218ENST00000521995 556 ntTSL 415.52■□□□□ 0.082e-6■■■□□ 17.1
RPS3P23396 ITGB2-223ENST00000523663 680 ntTSL 515.43■□□□□ 0.062e-6■■■□□ 17.1
RPS3P23396 ITGB2-214ENST00000517819 527 ntTSL 215.09■□□□□ 0.012e-6■■■□□ 17.1
RPS3P23396 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.024e-6■■■□□ 17.1
RPS3P23396 SUMF2-213ENST00000451338 912 ntAPPRIS ALT2 TSL 314.82□□□□□ -0.043e-8■■■□□ 17.1
RPS3P23396 ITGB2-224ENST00000524251 568 ntTSL 414.77□□□□□ -0.052e-6■■■□□ 17.1
RPS3P23396 BNIP3-203ENST00000631806 752 ntTSL 214.49□□□□□ -0.093e-8■■■□□ 17.1
Retrieved 100 of 24,271 protein–RNA pairs in 217.7 ms