Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFKB1P19838 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NFKB1P19838 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.23■□□□□ 0.51
NFKB1P19838 Z83836.1-201ENST00000624605 1642 ntBASIC18.23■□□□□ 0.51
NFKB1P19838 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.23■□□□□ 0.51
NFKB1P19838 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.23■□□□□ 0.51
NFKB1P19838 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.23■□□□□ 0.51
NFKB1P19838 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.23■□□□□ 0.51
NFKB1P19838 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.23■□□□□ 0.51
NFKB1P19838 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NFKB1P19838 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.23■□□□□ 0.51
NFKB1P19838 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.23■□□□□ 0.51
NFKB1P19838 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NFKB1P19838 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.23■□□□□ 0.51
NFKB1P19838 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.23■□□□□ 0.51
NFKB1P19838 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.23■□□□□ 0.51
NFKB1P19838 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NFKB1P19838 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NFKB1P19838 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NFKB1P19838 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NFKB1P19838 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
NFKB1P19838 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
NFKB1P19838 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NFKB1P19838 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.22■□□□□ 0.51
NFKB1P19838 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.22■□□□□ 0.51
NFKB1P19838 AL645929.1-201ENST00000420084 975 ntBASIC18.22■□□□□ 0.51
NFKB1P19838 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.22■□□□□ 0.51
NFKB1P19838 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.22■□□□□ 0.51
NFKB1P19838 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.22■□□□□ 0.51
NFKB1P19838 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 FAM210CP-201ENST00000445714 574 ntBASIC18.22■□□□□ 0.51
NFKB1P19838 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 AL049597.2-201ENST00000565575 961 ntBASIC18.22■□□□□ 0.51
NFKB1P19838 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
NFKB1P19838 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.22■□□□□ 0.51
NFKB1P19838 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.22■□□□□ 0.51
NFKB1P19838 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NFKB1P19838 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFKB1P19838 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NFKB1P19838 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NFKB1P19838 FZD10-202ENST00000539839 3282 ntBASIC18.21■□□□□ 0.51
NFKB1P19838 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.21■□□□□ 0.51
NFKB1P19838 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.21■□□□□ 0.51
NFKB1P19838 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms