Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 HLA-J-201ENST00000462773 1622 ntBASIC15.22■□□□□ 0.03
HIST1H1DP16402 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HIST1H1DP16402 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1DP16402 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 SLC25A1P2-201ENST00000430693 912 ntBASIC15.21■□□□□ 0.03
HIST1H1DP16402 TSPY17P-201ENST00000450329 467 ntBASIC15.21■□□□□ 0.03
HIST1H1DP16402 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 REXO1L10P-201ENST00000615707 1290 ntBASIC15.21■□□□□ 0.03
HIST1H1DP16402 REXO1L12P-201ENST00000622156 912 ntBASIC15.21■□□□□ 0.03
HIST1H1DP16402 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HIST1H1DP16402 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1DP16402 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST1H1DP16402 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HIST1H1DP16402 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.21■□□□□ 0.02
HIST1H1DP16402 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST1H1DP16402 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST1H1DP16402 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.21■□□□□ 0.02
HIST1H1DP16402 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 AL353719.1-201ENST00000566847 864 ntBASIC15.2■□□□□ 0.02
HIST1H1DP16402 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 AC010240.3-201ENST00000607688 395 ntBASIC15.2■□□□□ 0.02
HIST1H1DP16402 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 OR6D1P-203ENST00000641209 4860 ntBASIC15.2■□□□□ 0.02
HIST1H1DP16402 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H1DP16402 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1DP16402 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST1H1DP16402 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1DP16402 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST1H1DP16402 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1DP16402 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms