Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
GCFC2P16383 AC008764.6-201ENST00000595909 2069 ntBASIC20.24■□□□□ 0.83
GCFC2P16383 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 HCG4P8-203ENST00000443049 980 ntBASIC20.24■□□□□ 0.83
GCFC2P16383 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
GCFC2P16383 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.24■□□□□ 0.83
GCFC2P16383 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.24■□□□□ 0.83
GCFC2P16383 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.24■□□□□ 0.83
GCFC2P16383 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
GCFC2P16383 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GCFC2P16383 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.24■□□□□ 0.83
GCFC2P16383 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
GCFC2P16383 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCFC2P16383 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.23■□□□□ 0.83
GCFC2P16383 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.23■□□□□ 0.83
GCFC2P16383 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCFC2P16383 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCFC2P16383 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCFC2P16383 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCFC2P16383 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.23■□□□□ 0.83
GCFC2P16383 IGHV3-47-201ENST00000425060 335 ntBASIC20.23■□□□□ 0.83
GCFC2P16383 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GCFC2P16383 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.23■□□□□ 0.83
GCFC2P16383 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCFC2P16383 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.23■□□□□ 0.83
GCFC2P16383 AP000867.3-201ENST00000524675 377 ntBASIC20.23■□□□□ 0.83
GCFC2P16383 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
GCFC2P16383 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCFC2P16383 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
GCFC2P16383 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCFC2P16383 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
GCFC2P16383 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
GCFC2P16383 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.22■□□□□ 0.83
GCFC2P16383 AC104819.1-201ENST00000504587 486 ntBASIC20.22■□□□□ 0.83
GCFC2P16383 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.22■□□□□ 0.83
GCFC2P16383 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.22■□□□□ 0.83
GCFC2P16383 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.22■□□□□ 0.83
GCFC2P16383 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.22■□□□□ 0.83
GCFC2P16383 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.22■□□□□ 0.83
GCFC2P16383 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.22■□□□□ 0.83
GCFC2P16383 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GCFC2P16383 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCFC2P16383 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.21■□□□□ 0.83
GCFC2P16383 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.21■□□□□ 0.83
GCFC2P16383 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.21■□□□□ 0.83
GCFC2P16383 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.21■□□□□ 0.83
GCFC2P16383 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
GCFC2P16383 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
GCFC2P16383 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.21■□□□□ 0.83
GCFC2P16383 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.21■□□□□ 0.83
GCFC2P16383 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.21■□□□□ 0.83
GCFC2P16383 AC009533.2-201ENST00000543664 586 ntBASIC20.21■□□□□ 0.83
GCFC2P16383 AC074051.2-201ENST00000565115 352 ntBASIC20.21■□□□□ 0.83
GCFC2P16383 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.21■□□□□ 0.83
GCFC2P16383 NSUN5P1-202ENST00000421140 1535 ntBASIC20.21■□□□□ 0.83
GCFC2P16383 NSUN5P2-203ENST00000457352 1529 ntBASIC20.21■□□□□ 0.83
GCFC2P16383 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.21■□□□□ 0.83
GCFC2P16383 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GCFC2P16383 AC020916.1-201ENST00000587762 1774 ntBASIC20.21■□□□□ 0.83
GCFC2P16383 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GCFC2P16383 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GCFC2P16383 AC009949.1-201ENST00000623048 1830 ntBASIC20.2■□□□□ 0.82
GCFC2P16383 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GCFC2P16383 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.2■□□□□ 0.82
GCFC2P16383 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GCFC2P16383 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GCFC2P16383 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms