Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-EP13747 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-EP13747 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-EP13747 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-EP13747 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-EP13747 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-EP13747 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HLA-EP13747 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-EP13747 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-EP13747 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-EP13747 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-EP13747 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-EP13747 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-EP13747 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.08■□□□□ 0.49
HLA-EP13747 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.08■□□□□ 0.49
HLA-EP13747 IL9RP2-201ENST00000423948 1312 ntBASIC18.08■□□□□ 0.49
HLA-EP13747 AL138781.2-201ENST00000617896 1843 ntBASIC18.08■□□□□ 0.48
HLA-EP13747 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-EP13747 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-EP13747 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 HNRNPDP1-201ENST00000439535 754 ntBASIC18.08■□□□□ 0.48
HLA-EP13747 AC073648.2-201ENST00000510116 352 ntBASIC18.08■□□□□ 0.48
HLA-EP13747 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.08■□□□□ 0.48
HLA-EP13747 SART3-203ENST00000546611 1184 ntBASIC18.08■□□□□ 0.48
HLA-EP13747 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HLA-EP13747 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-EP13747 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 AL096828.2-201ENST00000567259 1965 ntBASIC18.08■□□□□ 0.48
HLA-EP13747 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.08■□□□□ 0.48
HLA-EP13747 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-EP13747 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-EP13747 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HLA-EP13747 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-EP13747 AC243591.1-201ENST00000452967 1364 ntBASIC18.07■□□□□ 0.48
HLA-EP13747 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-EP13747 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.07■□□□□ 0.48
HLA-EP13747 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-EP13747 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-EP13747 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.07■□□□□ 0.48
HLA-EP13747 SLC25A1P1-201ENST00000528351 927 ntBASIC18.07■□□□□ 0.48
HLA-EP13747 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-EP13747 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-EP13747 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-EP13747 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-EP13747 MIR7706-201ENST00000613747 67 ntBASIC18.07■□□□□ 0.48
HLA-EP13747 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-EP13747 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HLA-EP13747 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HLA-EP13747 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HLA-EP13747 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-EP13747 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-EP13747 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HLA-EP13747 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
HLA-EP13747 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HLA-EP13747 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-EP13747 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HLA-EP13747 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-EP13747 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-EP13747 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-EP13747 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-EP13747 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-EP13747 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.06■□□□□ 0.48
HLA-EP13747 SCARNA2-201ENST00000458748 420 ntBASIC18.06■□□□□ 0.48
HLA-EP13747 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.06■□□□□ 0.48
HLA-EP13747 AC021087.4-201ENST00000563761 564 ntBASIC18.06■□□□□ 0.48
HLA-EP13747 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-EP13747 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-EP13747 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms